Clarke said he was disappointed to hear boos on the full-time whistle at Hampden on Saturday and some were audible again in Liverpool after a second straight defeat.
The Scotland head coach promised an "unrecognisable" team from the one that started the timid loss to Japan.
He delivered that and changed to his previously favoured shape, with captain Andy Robertson back at left-wing back and Kieran Tierney on the left of the back three.
That system switch would have prompted groans from sections of the Tartan Army who want to see a more adventurous set-up, but the head coach was right to point out pre-match that the formation helped take Scotland to back-to-back Euros.
However, after a lively start, the Scots struggled to cope in and out of possession, with distances between midfield and defence as wide as the River Mersey, especially after possession turned over.
The movement of the Ivorians caused major problems, while decision making in attack was also questionable, with positional discipline lacking from midfield trio Billy Gilmour, Ryan Christie and Scott McTominay.
The latter did, at least, manage to force Ivory Coast goalkeeper Alban Lafont into a smart first-half stop.
The half-time introduction of Lewis Ferguson helped cover gaps in the Scotland midfield, but there was a lack of imagination going the other way, with wastefulness on show after winning possession in promising areas.
Even throughout an ultimately glorious World Cup qualifying campaign, Scotland often relied on moments.
It is difficult to picture what a Scotland goal looks like at present, which is a concern given the level of opposition Clarke's men will face in the US.