Paul Brown's late penalty denied the Ports a first away win in the Carling Premiership this season.
The visitors went ahead on 19 minutes when Gary McCutcheon converted a penalty after Thomas Wray's handball.
Portadown keeper Neil Armstrong spilled an Austin Friel strike but luckily the ball fell just wide.
Darren Kelly wasted a good chance for the Ports before Brown fired home from the spot with five minutes left after John Convery handled Friel's shot.
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