Bury are still in the League Two automatic promotion hunt, but Gillingham must settle for a play-off spot after their goalless draw.
The Shakers' Glynn Hurst saw his early half-volley saved by Simon Royce.
That was their best chance, and Gills' top scorer Simone Jackson flashed a shot just wide of the far post after Curtis Weston put him through.
The hosts will feel they should have won after Stuart Lewis saw his powerful second-half volley hit the post.
Gillingham: Royce, Fuller, Richards, King, Nutter, Lewis, Wright (Oli 61), Weston, Barcham, Jackson, McCammon. Subs Not Used: Bentley, Southall, Steer, Julian.
Booked: Lewis.
Bury: Brown, Haslam, Futcher, Sodje, Buchanan, Jones (Dawson 73), Welsh, Barry-Murphy, Bennett, Hurst (Jevons 83), Bishop. Subs Not Used: Cresswell, Racchi, Morrell.
Booked: Welsh, Bennett.
Att: 8,360.
Ref: Roger East (Wiltshire).
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